Class StrongSuppressorGeometry

Object

AbstractGeometry

StrongSuppressorGeometry

public class StrongSuppressorGeometry
extends AbstractGeometry

Geometry implementation for the strong suppressor graphs of Giakkoupis (2016).

See Also:

• Giakkoupis (2016) Amplifiers and Suppressors of Selection...

Field Summary

Fields inherited from class AbstractGeometry

connectivity, EMPTY_LINKS, engine, features, in, isInterspecies, isRegular, isRewired, isSingle, isUndirected, isValid, kin, kout, logger, name, network2D, network3D, out, pAddwire, pRewire, size, specs, type

Constructor Summary

Constructors

Constructor	Description
StrongSuppressorGeometry(EvoLudo engine)	Create a strong suppressor geometry tied to the given engine.

Method Summary

Modifier and Type	Method	Description
protected boolean	checkSettings()	Hook for subclasses to implement geometry specific checks.
void	init()	Generates a strong undirected suppressor of selection.

Methods inherited from class AbstractGeometry

addDirected, addEdgeAt, addLinkAt, addUndirected, alloc, check, clearLinksFrom, clearLinksTo, clone, create, create, decodeGeometry, deriveCompetitionGeometry, displaySingle, encodeGeometry, enforceSize, equals, getAddwire, getConnectivity, getEncodeKey, getFeatures, getLabel, getName, getNetwork2D, getNetwork3D, getRewire, getSize, getSpecs, getType, hashCode, isConsistent, isGraphConnected, isInterspecies, isLattice, isNeighborOf, isRegular, isRewired, isSingle, isType, isUndirected, isUnique, parse, parse, removeEdgeAt, removeLinkAt, rewire, rewireDirected, rewireEdgeAt, rewireLinkAt, rewireUndirected, setAddwire, setConnectivity, setInterspecies, setName, setNetwork2D, setNetwork3D, setRewire, setSingle, setSize, setType, swapEdges, usage, warn

Methods inherited from class Object

finalize, getClass, notify, notifyAll, toString, wait, wait, wait

Constructor Details

StrongSuppressorGeometry

public StrongSuppressorGeometry(EvoLudo engine)

Create a strong suppressor geometry tied to the given engine.

Parameters:

engine - EvoLudo pacemaker

Method Details

init

public void init()

Generates a strong undirected suppressor of selection. Population size obeys \(N=n^2(1+n(1+n))=n^2+n^3+n^4\) for integer \(n\) with three node types \(U=n^3\), \(V=n^4\) and \(W=n^2\). Each node in \(V\) connects to one node in \(U\) and to all nodes in \(W\).

Specified by:

init in class AbstractGeometry

See Also:

• Giakkoupis (2016) Amplifiers and Suppressors of Selection...

checkSettings

protected boolean checkSettings()

Description copied from class: AbstractGeometry

Hook for subclasses to implement geometry specific checks.

Overrides:

checkSettings in class AbstractGeometry

Returns:

true if adjustments require a reset