Class KlemmEguiluzGeometry

Object

AbstractGeometry

AbstractNetwork

KlemmEguiluzGeometry

public class KlemmEguiluzGeometry
extends AbstractNetwork

Scale-free/small-world network following the Klemm & Eguíluz growth process.

See Also:

• Klemm & Eguíluz (2001) Phys. Rev. E 65, 057102

Field Summary

Fields

Modifier and Type	Field	Description
private double	pSmallWorld	Probability to rewire links to create small-world shortcuts.

Fields inherited from class AbstractNetwork

MAX_TRIALS, rng

Fields inherited from class AbstractGeometry

cli, connectivity, derivedId, EMPTY_LINKS, engine, features, geometryId, in, isInterspecies, isRegular, isRewired, isSingle, isUndirected, isValid, kin, kout, logger, name, network2D, network3D, out, pAddwire, pRewire, size, specs, type

Constructor Summary

Constructors

Constructor	Description
KlemmEguiluzGeometry(EvoLudo engine)	Create a Klemm-Eguíluz small-world geometry managed by the supplied engine.

Method Summary

Modifier and Type	Method	Description
private double	clampProbability(double value)	Clamp the probability parameter into the range [0,1].
KlemmEguiluzGeometry	clone()	Clone geometry.
boolean	equals(Object obj)
int	hashCode()
void	init()	Generates a connected undirected scale-free/small-world network following the Klemm & Eguíluz growth process.
boolean	parse(String arg)	Parse geometry-specific CLI options.

Methods inherited from class AbstractNetwork

initGeometryDegreeDistr

Methods inherited from class AbstractGeometry

addDirected, addEdgeAt, addLinkAt, addUndirected, alloc, check, checkSettings, clearLinksFrom, clearLinksTo, create, create, create, decodeGeometry, deriveCompetitionGeometry, displaySingle, encodeGeometry, enforceSize, getAddwire, getCLI, getConnectivity, getEncodeKey, getFeatures, getLabel, getName, getNetwork2D, getNetwork3D, getRewire, getSize, getSpecs, getType, isConsistent, isDerivedFrom, isGraphConnected, isInterspecies, isLattice, isNeighborOf, isRegular, isRewired, isSingle, isType, isUndirected, isUnique, markDerivedFrom, parse, removeEdgeAt, removeLinkAt, rewire, rewireDirected, rewireEdgeAt, rewireLinkAt, rewireUndirected, setAddwire, setConnectivity, setInterspecies, setName, setNetwork2D, setNetwork3D, setRewire, setSingle, setSize, setType, swapEdges, usage, warn

Methods inherited from class Object

finalize, getClass, notify, notifyAll, toString, wait, wait, wait

Field Details

pSmallWorld

private double pSmallWorld

Probability to rewire links to create small-world shortcuts.

Constructor Details

KlemmEguiluzGeometry

public KlemmEguiluzGeometry(EvoLudo engine)

Create a Klemm-Eguíluz small-world geometry managed by the supplied engine.

Parameters:

engine - EvoLudo pacemaker

Method Details

parse

public boolean parse(String arg)

Description copied from class: AbstractGeometry

Parse geometry-specific CLI options.

Overrides:

parse in class AbstractGeometry

Parameters:

arg - the argument string without the geometry key

Returns:

true if parsing succeeded, false if invalid

clampProbability

private double clampProbability(double value)

Clamp the probability parameter into the range [0,1].

Parameters:

value - raw probability value

Returns:

clamped probability

init

public void init()

Generates a connected undirected scale-free/small-world network following the Klemm & Eguíluz growth process. Effective connectivity approaches \(k(N-1)/N\) and the final structure can be rewired (with probability klemmProbability) to add small-world shortcuts.

Specified by:

init in class AbstractGeometry

See Also:

• Klemm & Eguíluz (2001) Phys. Rev. E 65, 057102

clone

public KlemmEguiluzGeometry clone()

Description copied from class: AbstractGeometry

Clone geometry.

Requirements/notes:

1. Overrides clone() in Object but conflicts with GWT's aversion to clone()ing...
2. Remove @SuppressWarnings("all") to ensure that no other issues crept in when modifying method.

Overrides:

clone in class AbstractGeometry

Returns:

clone of geometry

hashCode

public int hashCode()

Overrides:

hashCode in class AbstractGeometry

equals

public boolean equals(Object obj)

Overrides:

equals in class AbstractGeometry