Uses of Class
org.evoludo.simulator.models.IBSPopulation

Packages that use IBSPopulation

Package	Description
org.evoludo.simulator.exec	Custom modules for running simulations on the command line.
org.evoludo.simulator.models	The models that generate evolutionary trajectories based on the specifications of each module.
org.evoludo.simulator.modules	The modules to implement various evolutionary models.

Uses of IBSPopulation in org.evoludo.simulator.exec

Subclasses of IBSPopulation in org.evoludo.simulator.exec

Modifier and Type	Class	Description
(package private) class	simCDL.simCDLIBS	The simulation for the CDL module.

Uses of IBSPopulation in org.evoludo.simulator.models

Classes in org.evoludo.simulator.models with type parameters of type IBSPopulation

Modifier and Type	Class	Description
class	IBSPopulation<M extends Module<?>, P extends IBSPopulation<?,?>>	The core class for individual based simulations.

Subclasses of IBSPopulation in org.evoludo.simulator.models

Modifier and Type	Class	Description
class	IBSCPopulation	The core class for individual based simulations with a single continuous trait.
class	IBSDPopulation	The core class for individual based simulations with discrete traits.
class	IBSMCPopulation	The core class for individual based simulations with multiple continuous traits.

Fields in org.evoludo.simulator.models declared as IBSPopulation

Modifier and Type	Field	Description
(package private) IBSPopulation<?,?>	IBS.debugFocalSpecies	Pointer to focal species for debugging.
protected P	IBSPopulation.opponent	The interaction partner/opponent of this population opponent.getModule()==getModule().getOpponent().
protected IBSPopulation<?,?>	IBS.population	Short-cut to species.get(0).getIBSPopulation() for single species models; null in multi-species models.

Methods in org.evoludo.simulator.models that return IBSPopulation

Modifier and Type	Method	Description
private IBSPopulation<?,?>	IBS.createIBSPopulation(Module<?> mod)	Factory method to create an IBSPopulation instance for the provided module type.
(package private) IBSPopulation<?,?>	IBS.getIBSPopulation(int id)	Helper routine to retrieve the IBSPopulation associated with module with id.
IBSPopulation<?,?>	IBS.pickFocalSpecies()	Pick focal population according to the selected scheme.
private IBSPopulation<?,?>	IBS.pickFocalSpecies(double[] rates, double total)	Pick focal species with a probability proportional to the entries in rates.
private IBSPopulation<?,?>	IBS.pickFocalSpecies(int skip)	Pick next focal species.

Methods in org.evoludo.simulator.models with parameters of type IBSPopulation

Modifier and Type	Method	Description
protected IBS.Event	IBS.pickEvent(IBSPopulation<?,?> pop)	Pick type of next event in focal population.
private boolean	IBS.restorePopulationState(Plist plist, IBSPopulation<?,?> pop, String name)	Restore the state of population pop from plist plist.
void	IBSCPopulation.setOpponentPop(IBSPopulation<?,?> opponent)
void	IBSDPopulation.setOpponentPop(IBSPopulation<?,?> opponent)
void	IBSMCPopulation.setOpponentPop(IBSPopulation<?,?> opponent)
void	IBSPopulation.setOpponentPop(IBSPopulation<?,?> opponent)	Set the interaction partner/opponent of this population.

Uses of IBSPopulation in org.evoludo.simulator.modules

Subclasses of IBSPopulation in org.evoludo.simulator.modules

Modifier and Type	Class	Description
class	ATBT.ATBTPop	Extends TBT.TBTPop to take advantage of kaleidoscope initializations.
class	CDL.IBSPop	The extension for IBS simulations specific to voluntary (non-linear) public goods games.
class	DemesTBT.IBSPop	Custom implemenation for individual based simulations in deme structured populations.
(package private) class	IBSPop	Individual based simulation implementation of the Lotka-Volterra model.
class	NetGames.IBSPop	The extension for IBS simulations implement cooperative actions on dynamical networks.
class	RSP.IBSPop	The extension for IBS simulations specific to 3×3 games.
class	SIR.IBSPop	Population for individual based simulations of the SIR module.
class	TBT.IBSPop	The extension for IBS simulations specific to populations engaging in 2×2 games.

Fields in org.evoludo.simulator.modules declared as IBSPopulation

Modifier and Type	Field	Description
(package private) IBSPopulation<?,?>	Module.ibspop	The field point to the IBSPopulation that represents this module in individual based simulations.

Methods in org.evoludo.simulator.modules that return IBSPopulation

Modifier and Type	Method	Description
IBSPopulation<?,?>	Module.createIBSPopulation()	Opportunity to supply custom individual based simulations.
IBSPopulation<?,?>	Module.getIBSPopulation()	Gets the IBSPopulation that represents this module in individual based simulations or null for all other types of models.

Methods in org.evoludo.simulator.modules with parameters of type IBSPopulation

Modifier and Type	Method	Description
void	Module.setIBSPopulation(IBSPopulation<?,?> ibs)	Sets the reference to the IBSPopulation that represents this module in individual based simulations.