Uses of Class
org.evoludo.simulator.Geometry

Packages that use Geometry

Package	Description
org.evoludo.graphics	The GWT graphics for rendering and visualizing evolutionary models.
org.evoludo.simulator	The toolkit to explore interactive evolutionary models.
org.evoludo.simulator.models	The models that generate evolutionary trajectories based on the specifications of each module.
org.evoludo.simulator.modules	The modules to implement various evolutionary models.
org.evoludo.simulator.views	The views to visualize results and interact with evolutionary models.

Uses of Geometry in org.evoludo.graphics

Fields in org.evoludo.graphics declared as Geometry

Modifier and Type	Field	Description
protected Geometry	GenericPopGraph.geometry	The structure of the population.

Methods in org.evoludo.graphics that return Geometry

Modifier and Type	Method	Description
Geometry	GenericPopGraph.getGeometry()	Get the geometry backing the graph.

Methods in org.evoludo.graphics with parameters of type Geometry

Modifier and Type	Method	Description
void	GenericPopGraph.setGeometry(Geometry geometry)	Set the geometry backing the graph.
void	PopGraph2D.setGeometry(Geometry geometry)

Constructors in org.evoludo.graphics with parameters of type Geometry

Modifier	Constructor	Description
	Network2DGWT(EvoLudo engine, Geometry geometry)	Create a new network in 2D for the given engine and geometry with a layouting process optimzed for GWT.
	Network3DGWT(EvoLudo engine, Geometry geometry)	Create a new network in 3D for the given engine and geometry with a layouting process optimzed for GWT.

Uses of Geometry in org.evoludo.simulator

Fields in org.evoludo.simulator declared as Geometry

Modifier and Type	Field	Description
protected Geometry	Network.geometry	The structure of the population.

Methods in org.evoludo.simulator that return Geometry

Modifier and Type	Method	Description
Geometry	Geometry.clone()	Clone geometry.
Geometry	Geometry.deriveCompetitionGeometry()	Derive competition geometry from current (interaction) geometry.
Geometry	Geometry.deriveInteractionGeometry(IBSPopulation opp)	Derive interaction geometry from current (competition) geometry.
Geometry	Network.getGeometry()	Get the geometry that is backing this network.

Methods in org.evoludo.simulator with parameters of type Geometry

Modifier and Type	Method	Description
abstract Network2D	EvoLudo.createNetwork2D(Geometry geometry)	Generate 2D network.
Network2D	EvoLudoGWT.createNetwork2D(Geometry geometry)
abstract Network3D	EvoLudo.createNetwork3D(Geometry geometry)	Generate 3D network.
Network3D	EvoLudoGWT.createNetwork3D(Geometry geometry)
static boolean	Geometry.displayUniqueGeometry(Geometry inter, Geometry comp)	Checks whether a single graphical representation can be used for the interaction and competition graphs.
boolean	Geometry.equals(Geometry geo)	Check if this Geometry and geo refer to the same structures.

Constructors in org.evoludo.simulator with parameters of type Geometry

Modifier	Constructor	Description
	Network(EvoLudo engine, Geometry geometry)	Create a new network for the given engine and geometry.
	Network2D(EvoLudo engine, Geometry geometry)	Create a new network in 2D for the given engine and geometry.
	Network3D(EvoLudo engine, Geometry geometry)	Create a new network in 3D for the given engine and geometry.

Uses of Geometry in org.evoludo.simulator.models

Fields in org.evoludo.simulator.models declared as Geometry

Modifier and Type	Field	Description
protected Geometry	IBSPopulation.competition	The geometry of the competition graph.
(package private) Geometry	IBSGroup.geometry	The geometry associated with this group.
protected Geometry	IBSPopulation.interaction	The geometry of the interaction graph.
protected Geometry	PDE.space	Geometry representing the spatial dimensions of this PDE.

Methods in org.evoludo.simulator.models that return Geometry

Modifier and Type	Method	Description
Geometry	IBSPopulation.createCompetitionGeometry()	Creates a new instance of the competition or imitation structure, if needed.
Geometry	IBSPopulation.createInteractionGeometry()	Creates a new instance of the interaction structure, if needed.
Geometry	IBSPopulation.getCompetitionGeometry()	Gets the structure of competition or imitations.
Geometry	PDE.getGeometry()	Gets the geometry representing the spatial structure of this PDE.
Geometry	IBSPopulation.getInteractionGeometry()	Gets the structure of interactions.

Methods in org.evoludo.simulator.models with parameters of type Geometry

Modifier and Type	Method	Description
boolean	IBSPopulation.checkGeometry(Geometry geom)	Provide opportunity/hook for subclasses to introduce new geometries.
boolean	IBSPopulation.generateGeometry(Geometry geom)	Provide opportunity/hook for subclasses to introduce new geometries.
boolean	IBSPopulation.parseGeometry(Geometry geom, String arg)	Provide opportunity/hook for subclasses to introduce new geometries.
void	IBSGroup.setGeometry(Geometry geometry)	Set the geometry associated with this group.

Uses of Geometry in org.evoludo.simulator.modules

Fields in org.evoludo.simulator.modules declared as Geometry

Modifier and Type	Field	Description
protected Geometry	Module.competition	The geometry of competition structure
protected Geometry	Module.interaction	The geometry of interaction structure
protected Geometry	Module.structure	The geometry of population (interaction and competition graphs are the same)

Methods in org.evoludo.simulator.modules that return Geometry

Modifier and Type	Method	Description
Geometry	Module.createGeometry()	Opportunity to supply Geometry, in case interaction and competition graphs are the same.
Geometry	Module.getCompetitionGeometry()	Gets the competition geometry.
Geometry	Module.getGeometry()	Gets the geometry of the population.
Geometry	Module.getInteractionGeometry()	Gets the interaction geometry.

Methods in org.evoludo.simulator.modules with parameters of type Geometry

Modifier and Type	Method	Description
boolean	NetGames.IBSPop.checkGeometry(Geometry geom)
boolean	NetGames.IBSPop.generateGeometry(Geometry geom)
boolean	NetGames.IBSPop.parseGeometry(Geometry geom, String arg)
void	Module.setGeometries(Geometry interaction, Geometry competition)	Sets different geometries for interactions and competition.

Uses of Geometry in org.evoludo.simulator.views

Methods in org.evoludo.simulator.views that return Geometry

Modifier and Type	Method	Description
private Geometry	Distribution.createGeometry(int nTraits)	Create a geometry for the given number of traits.

Methods in org.evoludo.simulator.views with parameters of type Geometry

Modifier and Type	Method	Description
private static String	GenericPop.formatInStructureAt(int node, Geometry geom)	Return a formatted string of the incoming neighbours on directed graphs at the given node.
private static String	GenericPop.formatOutStructureAt(int node, Geometry geom)	Return a formatted string of the outgoing neighbours on directed graphs at the given node.
private static String	GenericPop.formatStructureAt(int node, Geometry geom)	Return a formatted string of the neighbourhood structure at the given node.
private String	GenericPop.formatTraitsAt(int node, Geometry geom, G graph)	Return a formatted string of the traits of the opponents at the given node.
private int	Histogram.getDegreeBins(Geometry inter, Geometry comp)	Determine the number of bins required for the degree distributions of the interaction and competition geometries.
private int	Histogram.getDegreeGraphs(Geometry inter, Geometry comp)	Determine the number of histograms required for the degree distributions of the interaction and competition geometries.
private void	Histogram.getDegreeHistogramData(double[][] data, Geometry geometry, int idx, double ibinwidth)	Generate the degree histogram data for the given geometry.
private void	Histogram.getDegreeHistogramData(double[][] data, Geometry inter, Geometry comp)	Generate the degree histogram data for the given interaction and competition geometries.